Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sss family transporter | DWX04_10560 | Not Available | Negative | 2489761 - 2491503 | 64515.9 |
| galactose mutarotase | DWX04_10565 | Not Available | Negative | 2491530 - 2492684 | 42037.6 |
| galactokinase | DWX04_10570 | Not Available | Negative | 2492881 - 2494035 | 42994.0 |
| mfs transporter | DWX04_10575 | Not Available | Negative | 2494076 - 2495416 | 47498.5 |
| galactose mutarotase | DWX04_10580 | Not Available | Negative | 2495463 - 2496557 | 39986.6 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DWX04_10585 | Not Available | Negative | 2496652 - 2497938 | 48014.6 |
| molecular chaperone dnaj | DWX04_10590 | Not Available | Negative | 2498033 - 2499208 | 42201.2 |
| nucleotide exchange factor grpe | DWX04_10595 | Not Available | Negative | 2499228 - 2499848 | 23521.8 |
| atp-binding cassette domain-containing protein | DWX04_10600 | Not Available | Positive | 2500026 - 2501645 | 61317.0 |
| sgnh/gdsl hydrolase family protein | DWX04_10605 | Not Available | Positive | 2501834 - 2503345 | 57342.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

