Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DWX04_10510 | Not Available | Negative | 2479204 - 2480286 | 39184.6 |
| 4fe-4s dicluster domain-containing protein | DWX04_10515 | Not Available | Negative | 2480298 - 2480528 | 8117.04 |
| tetratricopeptide repeat protein | DWX04_10520 | Not Available | Negative | 2480539 - 2480835 | 11531.6 |
| duf4468 domain-containing protein | DWX04_10525 | Not Available | Negative | 2481199 - 2482296 | 40477.5 |
| ribose 5-phosphate isomerase b | DWX04_10530 | Not Available | Negative | 2482403 - 2482837 | 15944.1 |
| transketolase | DWX04_10535 | Not Available | Negative | 2482834 - 2484846 | 72450.5 |
| atpase | DWX04_10540 | Not Available | Negative | 2484981 - 2486579 | 57759.1 |
| l-arabinose isomerase | DWX04_10545 | Not Available | Negative | 2486682 - 2488211 | 57229.3 |
| l-ribulose-5-phosphate 4-epimerase | DWX04_10550 | Not Available | Negative | 2488251 - 2488937 | 24994.8 |
| nudix hydrolase | DWX04_10555 | Not Available | Negative | 2489008 - 2489685 | 26233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

