Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_10460 | Not Available | Positive | 2469356 - 2470756 | 52376.5 |
| hypothetical protein | DWX04_10465 | Not Available | Positive | 2470800 - 2472371 | 58572.0 |
| duf4421 domain-containing protein | DWX04_10470 | Not Available | Negative | 2472444 - 2473571 | 43106.2 |
| gfo/idh/moca family oxidoreductase | DWX04_10475 | Not Available | Negative | 2473581 - 2474570 | 36847.1 |
| glutamine abc transporter substrate-binding protein | DWX04_10480 | Not Available | Negative | 2474659 - 2475477 | 30987.1 |
| hypothetical protein | DWX04_10485 | Not Available | Negative | 2475486 - 2477597 | 80819.3 |
| hypothetical protein | DWX04_10490 | Not Available | Positive | 2477509 - 2477697 | 7588.42 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DWX04_10495 | Not Available | Negative | 2477691 - 2478233 | 19888.6 |
| 2-oxoglutarate oxidoreductase | DWX04_10500 | Not Available | Negative | 2478247 - 2479011 | 27912.9 |
| hypothetical protein | DWX04_10505 | Not Available | Negative | 2479030 - 2479197 | 6434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

