Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_10355 | Not Available | Positive | 2438593 - 2440377 | 69424.1 |
| sodium-translocating pyrophosphatase | DWX04_10360 | Not Available | Negative | 2440447 - 2442651 | 77024.7 |
| ygiq family radical sam protein | DWX04_10365 | Not Available | Negative | 2442914 - 2444800 | 72037.8 |
| hypothetical protein | DWX04_10370 | Not Available | Negative | 2444852 - 2445169 | 12244.6 |
| xanthan lyase | DWX04_10375 | Not Available | Negative | 2445260 - 2448130 | 106860.0 |
| alpha-1,3-galactosidase b | DWX04_10380 | Not Available | Positive | 2448213 - 2450030 | 69004.8 |
| acyltransferase | DWX04_10385 | Not Available | Negative | 2450113 - 2450670 | 21297.3 |
| hypothetical protein | DWX04_10390 | Not Available | Negative | 2450681 - 2450929 | 9238.45 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DWX04_10395 | Not Available | Positive | 2451080 - 2452723 | 59935.1 |
| glycoside hydrolase family 25 protein | DWX04_10400 | Not Available | Positive | 2452849 - 2453715 | 33910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

