Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX04_10305 | Not Available | Positive | 2426293 - 2427009 | 27619.6 |
| hypothetical protein | DWX04_10310 | Not Available | Positive | 2427014 - 2427826 | 30773.4 |
| aaa family atpase | DWX04_10315 | Not Available | Positive | 2427903 - 2429471 | 60479.0 |
| atp-dependent helicase | DWX04_10320 | Not Available | Positive | 2429611 - 2432013 | 91194.0 |
| amidohydrolase | DWX04_10325 | Not Available | Positive | 2432243 - 2433004 | 28481.8 |
| indolepyruvate ferredoxin oxidoreductase | DWX04_10330 | Not Available | Positive | 2433028 - 2434644 | 58802.5 |
| indolepyruvate oxidoreductase subunit beta | DWX04_10335 | Not Available | Positive | 2434641 - 2435222 | 21245.8 |
| pyridoxal phosphate-dependent aminotransferase | DWX04_10340 | Not Available | Positive | 2435227 - 2436531 | 48672.3 |
| phenylacetate--coa ligase | DWX04_10345 | Not Available | Positive | 2436626 - 2437927 | 48582.5 |
| amino acid-binding protein | DWX04_10350 | Not Available | Positive | 2437941 - 2438357 | 15402.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

