Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_10255 | Not Available | Negative | 2417962 - 2419029 | 39872.6 |
| hypothetical protein | DWX04_10260 | Not Available | Positive | 2419028 - 2419303 | 10400.9 |
| polysaccharide pyruvyl transferase family protein | DWX04_10265 | Not Available | Positive | 2419547 - 2420638 | 42725.5 |
| epsg family protein | DWX04_10270 | Not Available | Positive | 2420640 - 2421743 | 42427.0 |
| glycosyltransferase | DWX04_10275 | Not Available | Positive | 2421733 - 2422890 | 44101.2 |
| glycosyltransferase family 2 protein | DWX04_10280 | Not Available | Positive | 2423002 - 2423961 | 36493.2 |
| glycosyltransferase family 1 protein | DWX04_10285 | Not Available | Positive | 2424024 - 2425127 | 42063.5 |
| dna polymerase subunit beta | DWX04_10290 | Not Available | Positive | 2425227 - 2425520 | 11179.7 |
| duf86 domain-containing protein | DWX04_10295 | Not Available | Positive | 2425513 - 2425896 | 14546.1 |
| hypothetical protein | DWX04_10300 | Not Available | Negative | 2425924 - 2426238 | 12249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

