Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | DWX04_10200 | Not Available | Positive | 2407404 - 2408381 | 35909.1 |
| amino acid adenylation domain-containing protein | DWX04_10205 | Not Available | Positive | 2408383 - 2409894 | 57257.4 |
| n-acetyltransferase | DWX04_10210 | Not Available | Positive | 2409931 - 2410731 | 31821.7 |
| acyl carrier protein | DWX04_10215 | Not Available | Positive | 2410734 - 2410970 | 8783.45 |
| aldo/keto reductase | DWX04_10220 | Not Available | Positive | 2411045 - 2411965 | 35430.9 |
| polysaccharide biosynthesis protein | DWX04_10225 | Not Available | Positive | 2412097 - 2413623 | 57686.1 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_10235 | Not Available | Negative | 2414206 - 2414619 | 15257.5 |
| dna-binding protein | DWX04_10240 | Not Available | Negative | 2414769 - 2415242 | 16817.1 |
| duf4248 domain-containing protein | DWX04_10245 | Not Available | Positive | 2415523 - 2415762 | 9222.05 |
| toprim domain-containing protein | DWX04_10250 | Not Available | Negative | 2415871 - 2417877 | 74958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

