Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aspartate transaminase/aspartate 4-decarboxylase | DWX04_10150 | Not Available | Negative | 2391398 - 2393038 | 62644.2 |
| aspartate-alanine antiporter | DWX04_10155 | Not Available | Negative | 2393058 - 2394758 | 61070.4 |
| hypothetical protein | DWX04_10160 | Not Available | Positive | 2394884 - 2395705 | 31599.5 |
| tetratricopeptide repeat protein | DWX04_10165 | Not Available | Negative | 2395697 - 2397874 | 85990.3 |
| duf418 domain-containing protein | DWX04_10170 | Not Available | Negative | 2397936 - 2399120 | 45002.6 |
| transcription-repair coupling factor | DWX04_10175 | Not Available | Positive | 2399228 - 2402593 | 127134.0 |
| tonb family protein | DWX04_10180 | Not Available | Positive | 2402858 - 2403544 | 25618.8 |
| transcriptional regulator | DWX04_10185 | Not Available | Positive | 2404131 - 2404961 | 31555.8 |
| 4fe-4s dicluster domain-containing protein | DWX04_10190 | Not Available | Positive | 2405337 - 2407160 | 68641.6 |
| acyl carrier protein | DWX04_10195 | Not Available | Positive | 2407174 - 2407407 | 8794.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

