Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5056 domain-containing protein | DWX04_00660 | Not Available | Positive | 142387 - 142716 | 12355.1 |
| thymidylate synthase | DWX04_00665 | Not Available | Positive | 142798 - 143592 | 30480.3 |
| dihydrofolate reductase | DWX04_00670 | Not Available | Positive | 143676 - 144170 | 18849.7 |
| asnc family transcriptional regulator | DWX04_00675 | Not Available | Negative | 144174 - 144650 | 17875.6 |
| peptidase m64 | DWX04_00680 | Not Available | Positive | 144679 - 146064 | 52171.5 |
| gnat family n-acetyltransferase | DWX04_00685 | Not Available | Positive | 146099 - 146635 | 21182.4 |
| biopolymer transporter exbd | DWX04_00695 | Not Available | Negative | 146828 - 147292 | 17906.9 |
| biopolymer transporter exbd | DWX04_00700 | Not Available | Negative | 147292 - 147882 | 22472.8 |
| hypothetical protein | DWX04_00705 | Not Available | Negative | 147926 - 148387 | 16708.9 |
| mota/tolq/exbb proton channel family protein | DWX04_00710 | Not Available | Negative | 148395 - 149168 | 27566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

