Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4369 domain-containing protein | DWX04_10100 | Not Available | Positive | 2381989 - 2382666 | 25343.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DWX04_10105 | Not Available | Negative | 2382681 - 2383439 | 28645.4 |
| metallophosphoesterase | DWX04_10110 | Not Available | Negative | 2383479 - 2384639 | 43681.4 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DWX04_10115 | Not Available | Negative | 2384654 - 2385541 | 33465.9 |
| dihydroorotase | DWX04_10120 | Not Available | Negative | 2385538 - 2386878 | 49645.5 |
| polyprenol monophosphomannose synthase | DWX04_10125 | Not Available | Negative | 2386875 - 2387624 | 28446.6 |
| porin family protein | DWX04_10130 | Not Available | Negative | 2387777 - 2388403 | 23463.7 |
| duf4136 domain-containing protein | DWX04_10135 | Not Available | Negative | 2388445 - 2389083 | 24018.1 |
| copper homeostasis protein | DWX04_10140 | Not Available | Negative | 2389207 - 2389695 | 17145.3 |
| peptidase s41 | DWX04_10145 | Not Available | Negative | 2389852 - 2391249 | 52268.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

