Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s cluster-binding domain-containing protein | DWX04_10000 | Not Available | Positive | 2360264 - 2361097 | 31436.2 |
| duf4422 domain-containing protein | DWX04_10005 | Not Available | Positive | 2361200 - 2362042 | 33135.6 |
| acyltransferase | DWX04_10010 | Not Available | Positive | 2362050 - 2362658 | 22034.3 |
| o-antigen polysaccharide polymerase wzy | DWX04_10015 | Not Available | Positive | 2362687 - 2364021 | 51647.8 |
| glycosyltransferase family 2 protein | DWX04_10020 | Not Available | Positive | 2364232 - 2365098 | 33542.7 |
| haloacid dehalogenase-like hydrolase | DWX04_10025 | Not Available | Positive | 2365091 - 2365756 | 26103.5 |
| hypothetical protein | DWX04_10030 | Not Available | Positive | 2365735 - 2366535 | 31854.0 |
| glycosyltransferase family 1 protein | DWX04_10035 | Not Available | Positive | 2366708 - 2367712 | 39189.0 |
| fad-dependent oxidoreductase | DWX04_10040 | Not Available | Positive | 2367719 - 2368954 | 48412.8 |
| glycosyltransferase family 2 protein | DWX04_10045 | Not Available | Positive | 2369075 - 2370133 | 41606.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

