Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | DWX04_09785 | Not Available | Positive | 2290607 - 2290957 | 12822.7 |
| fructose-bisphosphatase class iii | DWX04_09790 | Not Available | Negative | 2291089 - 2293089 | 76533.3 |
| putative transporter | DWX04_09795 | Not Available | Negative | 2293099 - 2294760 | 59396.9 |
| nad(+) diphosphatase | DWX04_09800 | Not Available | Negative | 2294837 - 2295634 | 30147.3 |
| rna-binding transcriptional accessory protein | DWX04_09805 | Not Available | Negative | 2295657 - 2297786 | 79654.4 |
| abi family protein | DWX04_09815 | Not Available | Negative | 2299271 - 2300233 | 37634.4 |
| hypothetical protein | DWX04_09820 | Not Available | Negative | 2301197 - 2301421 | 8547.9 |
| glycoside hydrolase family 2 | DWX04_09825 | Not Available | Positive | 2301496 - 2304120 | 98317.5 |
| response regulator | DWX04_09830 | Not Available | Positive | 2304246 - 2308649 | 168843.0 |
| sugar phosphate isomerase/epimerase | DWX04_09835 | Not Available | Positive | 2308815 - 2309699 | 33237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

