Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DWX04_09735 | Not Available | Negative | 2278845 - 2280545 | 62540.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DWX04_09740 | Not Available | Negative | 2280582 - 2281349 | 28137.2 |
| dna repair protein recn | DWX04_09745 | Not Available | Negative | 2281400 - 2283061 | 62006.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DWX04_09750 | Not Available | Negative | 2283185 - 2284381 | 43194.4 |
| 3'-5' exonuclease | DWX04_09755 | Not Available | Negative | 2284378 - 2285154 | 29605.2 |
| dna polymerase iii subunit beta | DWX04_09760 | Not Available | Negative | 2285206 - 2286330 | 41323.5 |
| duf3127 domain-containing protein | DWX04_09765 | Not Available | Positive | 2286484 - 2286861 | 13929.4 |
| duf4270 domain-containing protein | DWX04_09770 | Not Available | Negative | 2287111 - 2288541 | 53522.1 |
| glycogen synthase | DWX04_09775 | Not Available | Negative | 2288561 - 2289385 | 31933.0 |
| pantoate--beta-alanine ligase | DWX04_09780 | Not Available | Positive | 2289737 - 2290585 | 31311.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

