Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate utilization protein | DWX04_09680 | Not Available | Positive | 2267939 - 2269306 | 51539.4 |
| hypothetical protein | DWX04_09685 | Not Available | Positive | 2269310 - 2269897 | 21730.2 |
| pyruvate formate lyase-activating protein | DWX04_09690 | Not Available | Negative | 2269999 - 2270727 | 27977.5 |
| formate c-acetyltransferase | DWX04_09695 | Not Available | Negative | 2270796 - 2273024 | 84089.3 |
| Trna-glu | Not Available | Not Available | Positive | 2273228 - 2273303 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2273657 - 2273746 | Not Available |
| hypothetical protein | DWX04_09710 | Not Available | Negative | 2273725 - 2273916 | 7204.75 |
| Trna-cys | Not Available | Not Available | Positive | 2274426 - 2274500 | Not Available |
| ferrous iron transport protein b | DWX04_09725 | Not Available | Negative | 2274813 - 2277281 | 92727.4 |
| trna lysidine(34) synthetase tils | DWX04_09730 | Not Available | Positive | 2277402 - 2278706 | 50096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

