Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_09365 | Not Available | Negative | 2218761 - 2221439 | 101483.0 |
| duf2693 domain-containing protein | DWX04_09370 | Not Available | Negative | 2221600 - 2221932 | 13139.2 |
| rna polymerase sigma factor | DWX04_09375 | Not Available | Negative | 2222038 - 2222523 | 18831.8 |
| hypothetical protein | DWX04_09380 | Not Available | Negative | 2222520 - 2222789 | 10245.6 |
| hypothetical protein | DWX04_09385 | Not Available | Negative | 2222890 - 2223459 | 21695.3 |
| phage tail tape measure protein | DWX04_09390 | Not Available | Negative | 2223456 - 2227319 | 142639.0 |
| hypothetical protein | DWX04_09395 | Not Available | Negative | 2227322 - 2227510 | 7156.75 |
| hypothetical protein | DWX04_09400 | Not Available | Negative | 2227518 - 2228039 | 20015.9 |
| hypothetical protein | DWX04_09405 | Not Available | Negative | 2228254 - 2229087 | 30347.1 |
| hypothetical protein | DWX04_09410 | Not Available | Negative | 2229084 - 2229653 | 21745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

