Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DWX04_09265 | Not Available | Negative | 2192350 - 2194056 | 63892.1 |
| four helix bundle protein | DWX04_09270 | Not Available | Negative | 2194098 - 2194478 | 14337.4 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DWX04_09275 | Not Available | Negative | 2194514 - 2195533 | 36698.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | DWX04_09280 | Not Available | Negative | 2195539 - 2196432 | 31901.2 |
| hypothetical protein | DWX04_09285 | Not Available | Positive | 2196799 - 2197059 | 9561.44 |
| hypothetical protein | DWX04_09290 | Not Available | Positive | 2197138 - 2198202 | 40208.2 |
| hypothetical protein | DWX04_09295 | Not Available | Positive | 2198199 - 2198777 | 22811.8 |
| signal peptidase i | DWX04_09300 | Not Available | Positive | 2198774 - 2199595 | 32000.6 |
| hypothetical protein | DWX04_09305 | Not Available | Positive | 2199749 - 2200291 | 19666.0 |
| tolc family protein | DWX04_09310 | Not Available | Positive | 2200423 - 2201820 | 51991.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

