Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | DWX04_09215 | Not Available | Negative | 2183211 - 2184455 | 44862.2 |
| gxxexxy protein | DWX04_09220 | Not Available | Negative | 2184493 - 2184870 | 14789.8 |
| glutamate formimidoyltransferase | DWX04_09225 | Not Available | Negative | 2184888 - 2185790 | 33271.3 |
| formiminotransferase-cyclodeaminase | DWX04_09230 | Not Available | Negative | 2185738 - 2185851 | 4348.15 |
| urocanate hydratase | DWX04_09235 | Not Available | Negative | 2185873 - 2187870 | 74524.0 |
| hypothetical protein | DWX04_09240 | Not Available | Negative | 2188132 - 2188317 | 7426.38 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | DWX04_09245 | Not Available | Negative | 2188396 - 2189613 | 46297.2 |
| duf2027 domain-containing protein | DWX04_09250 | Not Available | Positive | 2189678 - 2190766 | 41096.4 |
| paai family thioesterase | DWX04_09255 | Not Available | Positive | 2190794 - 2191204 | 14765.8 |
| histidine decarboxylase | DWX04_09260 | Not Available | Negative | 2191284 - 2191892 | 22154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

