Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DWX04_09160 | Not Available | Positive | 2172759 - 2174303 | 58211.7 |
| hypothetical protein | DWX04_09170 | Not Available | Positive | 2174710 - 2175333 | 23911.5 |
| hypothetical protein | DWX04_09175 | Not Available | Positive | 2175345 - 2175641 | 11192.6 |
| hypothetical protein | DWX04_09180 | Not Available | Positive | 2175663 - 2176403 | 29424.1 |
| hypothetical protein | DWX04_09185 | Not Available | Positive | 2176390 - 2177037 | 25817.5 |
| wyl domain-containing protein | DWX04_09190 | Not Available | Positive | 2177072 - 2177986 | 35996.9 |
| is1182 family transposase | DWX04_09195 | Not Available | Positive | 2178143 - 2179804 | 65214.6 |
| nudix domain-containing protein | DWX04_09200 | Not Available | Negative | 2180417 - 2180917 | 19013.3 |
| histidine ammonia-lyase | DWX04_09205 | Not Available | Negative | 2181036 - 2182532 | 55209.0 |
| methenyltetrahydrofolate cyclohydrolase | DWX04_09210 | Not Available | Negative | 2182567 - 2183190 | 22967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

