Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWX04_09010 | Not Available | Negative | 2136501 - 2137403 | 35311.8 |
| hypothetical protein | DWX04_09015 | Not Available | Positive | 2137615 - 2138295 | 24715.3 |
| hybrid sensor histidine kinase/response regulator | DWX04_09020 | Not Available | Positive | 2138509 - 2142831 | 165133.0 |
| duf5060 domain-containing protein | DWX04_09025 | Not Available | Positive | 2142996 - 2144600 | 61924.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DWX04_09030 | Not Available | Positive | 2144722 - 2145336 | 22216.8 |
| deor/glpr transcriptional regulator | DWX04_09035 | Not Available | Positive | 2145348 - 2146103 | 27350.1 |
| transketolase | DWX04_09040 | Not Available | Positive | 2146446 - 2147291 | 31397.7 |
| transketolase family protein | DWX04_09045 | Not Available | Positive | 2147281 - 2148219 | 33638.5 |
| glycerol kinase glpk | DWX04_09050 | Not Available | Positive | 2148245 - 2149741 | 55251.4 |
| fucose isomerase | DWX04_09055 | Not Available | Positive | 2149775 - 2151199 | 52315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

