Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | DWX04_00545 | Not Available | Negative | 119094 - 119594 | 18878.7 |
| had family hydrolase | DWX04_00550 | Not Available | Positive | 119657 - 120310 | 24293.1 |
| doxx family protein | DWX04_00560 | Not Available | Positive | 120548 - 120988 | 16186.6 |
| duf4435 domain-containing protein | DWX04_00565 | Not Available | Negative | 120994 - 121989 | 39179.5 |
| atp-binding cassette domain-containing protein | DWX04_00570 | Not Available | Negative | 122011 - 122832 | 31108.5 |
| dmt family transporter | DWX04_00575 | Not Available | Positive | 122915 - 123841 | 33083.5 |
| sdr family nad(p)-dependent oxidoreductase | DWX04_00580 | Not Available | Negative | 123949 - 124809 | 31842.1 |
| nadh:flavin oxidoreductase | DWX04_00585 | Not Available | Negative | 124806 - 126029 | 45532.4 |
| duf1295 domain-containing protein | DWX04_00590 | Not Available | Negative | 126092 - 126856 | 29496.6 |
| gnat family n-acetyltransferase | DWX04_00600 | Not Available | Positive | 127426 - 127887 | 17839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

