Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_08800 | Not Available | Negative | 2078791 - 2079990 | 43755.0 |
| peroxide stress protein yaaa | DWX04_08805 | Not Available | Negative | 2080097 - 2080864 | 29392.5 |
| tlpa family protein disulfide reductase | DWX04_08810 | Not Available | Positive | 2080952 - 2081452 | 19151.4 |
| tonb-dependent receptor | DWX04_08815 | Not Available | Positive | 2081473 - 2084277 | 106589.0 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DWX04_08820 | Not Available | Negative | 2084343 - 2087564 | 119478.0 |
| hypothetical protein | DWX04_08825 | Not Available | Negative | 2087819 - 2088610 | 29912.6 |
| tryptophan--trna ligase | DWX04_08830 | Not Available | Positive | 2088714 - 2089808 | 41376.8 |
| Trna-val | Not Available | Not Available | Positive | 2090024 - 2090098 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2090137 - 2090211 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2090250 - 2090327 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

