Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | DWX04_08700 | Not Available | Positive | 2053751 - 2054422 | 24864.8 |
| atp-dependent clp protease atp-binding subunit clpx | DWX04_08705 | Not Available | Positive | 2054546 - 2055796 | 46679.9 |
| dna helicase recq | DWX04_08710 | Not Available | Positive | 2055954 - 2058134 | 81679.6 |
| helicase | DWX04_08715 | Not Available | Positive | 2058812 - 2060908 | 80650.3 |
| hypothetical protein | DWX04_08720 | Not Available | Negative | 2061032 - 2061466 | 17229.6 |
| hypothetical protein | DWX04_08725 | Not Available | Negative | 2061487 - 2061708 | 8975.27 |
| imp dehydrogenase | DWX04_08730 | Not Available | Positive | 2061717 - 2063192 | 52760.1 |
| peptidylprolyl isomerase | DWX04_08735 | Not Available | Positive | 2063205 - 2064542 | 52176.4 |
| peptidyl-prolyl cis-trans isomerase | DWX04_08740 | Not Available | Positive | 2064579 - 2065451 | 34132.6 |
| peptidylprolyl isomerase | DWX04_08745 | Not Available | Positive | 2065456 - 2066814 | 52289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

