Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf177 domain-containing protein | DWX04_08650 | Not Available | Positive | 2044832 - 2045365 | 19819.5 |
| 50s ribosomal protein l32 | DWX04_08655 | Not Available | Positive | 2045377 - 2045562 | 6838.3 |
| ketoacyl-acp synthase iii | DWX04_08660 | Not Available | Positive | 2045667 - 2046671 | 36862.4 |
| gtpase era | DWX04_08665 | Not Available | Positive | 2046754 - 2047635 | 33673.8 |
| ribosome biogenesis gtpase der | DWX04_08670 | Not Available | Positive | 2047669 - 2048982 | 49388.4 |
| abc transporter atp-binding protein | DWX04_08675 | Not Available | Negative | 2049060 - 2049824 | 28911.9 |
| abc transporter permease | DWX04_08680 | Not Available | Negative | 2049821 - 2050564 | 27369.4 |
| lps export abc transporter atp-binding protein | DWX04_08685 | Not Available | Positive | 2050693 - 2051514 | 31018.3 |
| rna-binding protein | DWX04_08690 | Not Available | Negative | 2051588 - 2051833 | 9049.81 |
| trigger factor | DWX04_08695 | Not Available | Positive | 2052215 - 2053570 | 51542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

