Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_08595 | Not Available | Positive | 2036878 - 2037084 | 7794.56 |
| dna-binding response regulator | DWX04_08600 | Not Available | Positive | 2037081 - 2037461 | 14932.1 |
| hypothetical protein | DWX04_08605 | Not Available | Positive | 2037445 - 2037744 | 11204.8 |
| dna-binding protein | DWX04_08610 | Not Available | Positive | 2038106 - 2039041 | 34526.9 |
| hnh endonuclease | DWX04_08615 | Not Available | Positive | 2039028 - 2039846 | 31581.9 |
| hypothetical protein | DWX04_08620 | Not Available | Positive | 2039846 - 2040271 | 16611.0 |
| hypothetical protein | DWX04_08625 | Not Available | Positive | 2040271 - 2040915 | 23797.1 |
| atp-dependent helicase | DWX04_08630 | Not Available | Positive | 2040912 - 2042606 | 64689.2 |
| vrr-nuc domain-containing protein | DWX04_08635 | Not Available | Positive | 2042603 - 2042965 | 13929.9 |
| hypothetical protein | DWX04_08645 | Not Available | Positive | 2043764 - 2044417 | 24371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

