Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4296 domain-containing protein | DWX04_08395 | Not Available | Negative | 1993692 - 1994666 | 37267.1 |
| lipoprotein signal peptidase | DWX04_08400 | Not Available | Negative | 1994670 - 1995308 | 24149.8 |
| trar/dksa family transcriptional regulator | DWX04_08405 | Not Available | Negative | 1995418 - 1995798 | 14347.1 |
| isoleucine--trna ligase | DWX04_08410 | Not Available | Negative | 1995822 - 1999310 | 132206.0 |
| arac family transcriptional regulator | DWX04_08415 | Not Available | Negative | 1999519 - 2000352 | 32094.1 |
| peptidase | DWX04_08420 | Not Available | Negative | 2000851 - 2001669 | 29692.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DWX04_08425 | Not Available | Negative | 2001923 - 2002597 | 23919.2 |
| sugar kinase | DWX04_08430 | Not Available | Negative | 2002707 - 2003729 | 37020.8 |
| laci family dna-binding transcriptional regulator | DWX04_08435 | Not Available | Positive | 2003973 - 2005046 | 41147.5 |
| altronate dehydratase | DWX04_08440 | Not Available | Positive | 2005068 - 2006558 | 54216.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

