Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix family transcriptional regulator | DWX04_08340 | Not Available | Positive | 1986113 - 1987075 | 37689.8 |
| mbl fold metallo-hydrolase | DWX04_08345 | Not Available | Positive | 1987229 - 1988032 | 29900.9 |
| Trna-lys | Not Available | Not Available | Positive | 1988121 - 1988196 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1988218 - 1988293 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 1988311 - 1988386 | Not Available |
| hypothetical protein | DWX04_08365 | Not Available | Negative | 1988517 - 1988735 | 8572.49 |
| hypothetical protein | DWX04_08370 | Not Available | Negative | 1989197 - 1989781 | 21966.4 |
| hypothetical protein | DWX04_08380 | Not Available | Negative | 1990100 - 1992424 | 88960.3 |
| rna methyltransferase | DWX04_08385 | Not Available | Positive | 1992526 - 1993281 | 27967.9 |
| hypothetical protein | DWX04_08390 | Not Available | Negative | 1993353 - 1993676 | 12222.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

