Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-4 c(11)-methyltransferase | DWX04_08290 | Not Available | Positive | 1973285 - 1975096 | 67021.3 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DWX04_08295 | Not Available | Positive | 1975122 - 1976918 | 66027.2 |
| abc transporter atp-binding protein | DWX04_08300 | Not Available | Negative | 1976940 - 1977962 | 37730.9 |
| iron abc transporter permease | DWX04_08305 | Not Available | Negative | 1977962 - 1978999 | 36745.8 |
| iron abc transporter substrate-binding protein | DWX04_08310 | Not Available | Negative | 1979011 - 1980162 | 43320.0 |
| precorrin-2 c(20)-methyltransferase | DWX04_08315 | Not Available | Positive | 1980266 - 1980994 | 27447.1 |
| hypothetical protein | DWX04_08320 | Not Available | Negative | 1980957 - 1981370 | 15741.7 |
| tagaturonate reductase | DWX04_08325 | Not Available | Negative | 1981472 - 1982911 | 53907.1 |
| uronate isomerase | DWX04_08330 | Not Available | Positive | 1983237 - 1984643 | 54309.7 |
| tlpa family protein disulfide reductase | DWX04_08335 | Not Available | Negative | 1984732 - 1985931 | 45999.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

