Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_08240 | Not Available | Negative | 1960514 - 1960894 | 13813.3 |
| tonb-dependent receptor | DWX04_08245 | Not Available | Positive | 1961333 - 1963510 | 81237.5 |
| abc transporter substrate-binding protein | DWX04_08250 | Not Available | Positive | 1963524 - 1964681 | 43506.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWX04_08255 | Not Available | Negative | 1964789 - 1966549 | 64676.7 |
| arac family transcriptional regulator | DWX04_08260 | Not Available | Negative | 1966736 - 1967623 | 34126.2 |
| arac family transcriptional regulator | DWX04_08265 | Not Available | Negative | 1967655 - 1968563 | 35396.4 |
| flavodoxin | DWX04_08270 | Not Available | Positive | 1968889 - 1969425 | 19869.9 |
| flavin reductase family protein | DWX04_08275 | Not Available | Positive | 1969431 - 1969991 | 20230.2 |
| precorrin-3b c(17)-methyltransferase | DWX04_08280 | Not Available | Positive | 1970671 - 1972077 | 51810.8 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | DWX04_08285 | Not Available | Positive | 1972082 - 1973263 | 44297.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

