Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWX04_08185 | Not Available | Negative | 1942407 - 1942982 | 22193.8 |
| cobyrinate a,c-diamide synthase | DWX04_08190 | Not Available | Negative | 1942979 - 1944307 | 49154.6 |
| putative transporter | DWX04_08195 | Not Available | Positive | 1944543 - 1946231 | 60780.7 |
| tonb-dependent receptor | DWX04_08200 | Not Available | Positive | 1946624 - 1948801 | 81377.8 |
| tonb-dependent receptor | DWX04_08205 | Not Available | Positive | 1949173 - 1951233 | 78295.4 |
| heme-binding protein | DWX04_08210 | Not Available | Positive | 1951267 - 1952463 | 45154.6 |
| ribonucleoside-diphosphate reductase subunit alpha | DWX04_08220 | Not Available | Positive | 1953030 - 1955549 | 95717.5 |
| ribonucleotide-diphosphate reductase subunit beta | DWX04_08225 | Not Available | Positive | 1955712 - 1956761 | 41348.8 |
| methylenetetrahydrofolate reductase | DWX04_08230 | Not Available | Negative | 1956852 - 1957805 | 35972.1 |
| tonb-dependent receptor | DWX04_08235 | Not Available | Negative | 1958102 - 1960405 | 85921.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

