Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | DWX04_08065 | Not Available | Positive | 1919349 - 1920581 | 46069.1 |
| atp-dependent helicase | DWX04_08070 | Not Available | Positive | 1920602 - 1921879 | 47491.1 |
| hypothetical protein | DWX04_08075 | Not Available | Negative | 1922265 - 1922540 | 10163.2 |
| duf4738 domain-containing protein | DWX04_08080 | Not Available | Negative | 1922591 - 1923379 | 29375.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DWX04_08085 | Not Available | Negative | 1923403 - 1924716 | 48150.3 |
| spor domain-containing protein | DWX04_08090 | Not Available | Positive | 1924835 - 1925965 | 42083.4 |
| fha domain-containing protein | DWX04_08095 | Not Available | Positive | 1925981 - 1926505 | 19818.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DWX04_08100 | Not Available | Positive | 1926510 - 1927019 | 19446.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DWX04_08105 | Not Available | Positive | 1927028 - 1928065 | 37449.5 |
| adenosylcobinamide-gdp ribazoletransferase | DWX04_08110 | Not Available | Positive | 1928068 - 1928817 | 27738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

