Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DWX04_08015 | Not Available | Positive | 1907600 - 1908274 | 24839.1 |
| dmt family transporter | DWX04_08020 | Not Available | Negative | 1908601 - 1909488 | 31789.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWX04_08025 | Not Available | Negative | 1909576 - 1910763 | 44190.9 |
| diacylglycerol kinase family lipid kinase | DWX04_08030 | Not Available | Positive | 1911008 - 1912042 | 38141.2 |
| methyltransferase domain-containing protein | DWX04_08035 | Not Available | Negative | 1912123 - 1912827 | 26267.5 |
| endopeptidase la | DWX04_08040 | Not Available | Positive | 1913009 - 1915486 | 92607.4 |
| trna guanosine(34) transglycosylase tgt | DWX04_08045 | Not Available | Positive | 1915489 - 1916619 | 42665.6 |
| yjgp/yjgq family permease | DWX04_08050 | Not Available | Positive | 1916630 - 1917802 | 45473.9 |
| had family phosphatase | DWX04_08055 | Not Available | Negative | 1917803 - 1918423 | 23389.8 |
| hypothetical protein | DWX04_08060 | Not Available | Negative | 1918582 - 1919076 | 18386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

