Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_07850 | Not Available | Negative | 1867383 - 1868051 | 25100.8 |
| aminopeptidase | DWX04_07860 | Not Available | Negative | 1868747 - 1870123 | 51844.2 |
| sodium:proton antiporter | DWX04_07865 | Not Available | Negative | 1870235 - 1871686 | 51409.2 |
| hded family acid-resistance protein | DWX04_07870 | Not Available | Positive | 1871880 - 1872443 | 20986.6 |
| translocation/assembly module tamb | DWX04_07875 | Not Available | Positive | 1872508 - 1876968 | 166368.0 |
| agmatine deiminase family protein | DWX04_07880 | Not Available | Positive | 1877023 - 1878048 | 39288.6 |
| acyltransferase | DWX04_07885 | Not Available | Positive | 1878060 - 1878947 | 33260.4 |
| duf4251 domain-containing protein | DWX04_07890 | Not Available | Positive | 1879062 - 1879652 | 21487.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DWX04_07895 | Not Available | Negative | 1879746 - 1880273 | 19617.8 |
| aspartate--trna ligase | DWX04_07900 | Not Available | Negative | 1880448 - 1882211 | 66503.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

