Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DWX04_07800 | Not Available | Negative | 1859303 - 1860871 | 59919.5 |
| duf86 domain-containing protein | DWX04_07805 | Not Available | Negative | 1860996 - 1861388 | 15161.6 |
| dna polymerase subunit beta | DWX04_07810 | Not Available | Negative | 1861381 - 1861674 | 11114.5 |
| hypothetical protein | DWX04_07815 | Not Available | Negative | 1861752 - 1861949 | 7933.8 |
| virulence protein e | DWX04_07820 | Not Available | Positive | 1862224 - 1862889 | 25130.9 |
| duf3987 domain-containing protein | DWX04_07825 | Not Available | Positive | 1862962 - 1864767 | 67600.2 |
| duf4248 domain-containing protein | DWX04_07830 | Not Available | Positive | 1865160 - 1865354 | 7367.08 |
| hypothetical protein | DWX04_07835 | Not Available | Positive | 1865450 - 1865680 | 8345.06 |
| dna-binding protein | DWX04_07840 | Not Available | Positive | 1865720 - 1866214 | 18040.5 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_07845 | Not Available | Positive | 1866606 - 1867124 | 19565.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

