Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | DWX04_07750 | Not Available | Positive | 1853956 - 1854753 | 29142.0 |
| translation initiation factor if-1 | DWX04_07755 | Not Available | Positive | 1854755 - 1854973 | 8235.14 |
| 50s ribosomal protein l36 | DWX04_07760 | Not Available | Positive | 1854988 - 1855104 | 4586.82 |
| 30s ribosomal protein s13 | DWX04_07765 | Not Available | Positive | 1855138 - 1855518 | 14121.3 |
| 30s ribosomal protein s11 | DWX04_07770 | Not Available | Positive | 1855530 - 1855919 | 13878.8 |
| 30s ribosomal protein s4 | DWX04_07775 | Not Available | Positive | 1856036 - 1856641 | 22540.2 |
| dna-directed rna polymerase subunit alpha | DWX04_07780 | Not Available | Positive | 1856653 - 1857645 | 37535.1 |
| 50s ribosomal protein l17 | DWX04_07785 | Not Available | Positive | 1857649 - 1858137 | 17965.6 |
| hepn domain-containing protein | DWX04_07790 | Not Available | Negative | 1858414 - 1858815 | 15666.6 |
| nucleotidyltransferase domain-containing protein | DWX04_07795 | Not Available | Negative | 1858812 - 1859120 | 11591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

