Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | DWX04_07600 | Not Available | Positive | 1830696 - 1831070 | 12654.2 |
| hypothetical protein | DWX04_07605 | Not Available | Positive | 1831067 - 1831126 | 2101.52 |
| dna-directed rna polymerase subunit beta | DWX04_07610 | Not Available | Positive | 1831173 - 1834985 | 142493.0 |
| dna-directed rna polymerase subunit beta' | DWX04_07615 | Not Available | Positive | 1835024 - 1839310 | 158848.0 |
| duf3467 domain-containing protein | DWX04_07620 | Not Available | Positive | 1839519 - 1839860 | 12561.0 |
| 30s ribosomal protein s12 | DWX04_07625 | Not Available | Positive | 1840049 - 1840462 | 14994.4 |
| 30s ribosomal protein s7 | DWX04_07630 | Not Available | Positive | 1840611 - 1841087 | 18204.1 |
| elongation factor g | DWX04_07635 | Not Available | Positive | 1841119 - 1843236 | 77460.5 |
| 30s ribosomal protein s10 | DWX04_07640 | Not Available | Positive | 1843322 - 1843627 | 11419.0 |
| 50s ribosomal protein l3 | DWX04_07645 | Not Available | Positive | 1843649 - 1844266 | 21900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

