Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1826492 - 1826574 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1826608 - 1826680 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 1826693 - 1826764 | Not Available |
| elongation factor tu | DWX04_07565 | Not Available | Positive | 1826816 - 1828000 | 43565.6 |
| Trna-trp | Not Available | Not Available | Positive | 1828058 - 1828133 | Not Available |
| preprotein translocase subunit sece | DWX04_07575 | Not Available | Positive | 1828147 - 1828341 | 7402.06 |
| transcription termination/antitermination factor nusg | DWX04_07580 | Not Available | Positive | 1828355 - 1828897 | 20174.3 |
| 50s ribosomal protein l11 | DWX04_07585 | Not Available | Positive | 1828958 - 1829401 | 15797.5 |
| 50s ribosomal protein l1 | DWX04_07590 | Not Available | Positive | 1829417 - 1830115 | 24935.6 |
| 50s ribosomal protein l10 | DWX04_07595 | Not Available | Positive | 1830131 - 1830649 | 18678.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

