Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWX04_07450 | Not Available | Negative | 1800503 - 1802143 | 61732.4 |
| tonb-dependent receptor | DWX04_07455 | Not Available | Negative | 1802164 - 1805187 | 111949.0 |
| duf1624 domain-containing protein | DWX04_07460 | Not Available | Negative | 1805263 - 1806381 | 41656.0 |
| alpha-n-acetylglucosaminidase | DWX04_07465 | Not Available | Negative | 1806389 - 1808653 | 87049.7 |
| hybrid sensor histidine kinase/response regulator | DWX04_07470 | Not Available | Negative | 1808736 - 1812956 | 162664.0 |
| Trna-asn | Not Available | Not Available | Positive | 1813096 - 1813169 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 1813195 - 1813268 | Not Available |
| adenosine kinase | DWX04_07485 | Not Available | Positive | 1813349 - 1814335 | 35264.9 |
| pdz domain-containing protein | DWX04_07490 | Not Available | Positive | 1814379 - 1816073 | 63106.7 |
| hypothetical protein | DWX04_07495 | Not Available | Negative | 1816139 - 1818436 | 87663.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

