Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | DWX04_07250 | Not Available | Positive | 1738582 - 1739277 | 26096.9 |
| orotate phosphoribosyltransferase | DWX04_07255 | Not Available | Positive | 1739377 - 1740015 | 23412.4 |
| srpbcc family protein | DWX04_07260 | Not Available | Positive | 1740113 - 1740517 | 15211.6 |
| argininosuccinate lyase | DWX04_07265 | Not Available | Positive | 1740532 - 1741872 | 50637.4 |
| l-glyceraldehyde 3-phosphate reductase | DWX04_07270 | Not Available | Positive | 1741896 - 1742888 | 36706.9 |
| Trna-gly | Not Available | Not Available | Positive | 1742959 - 1743031 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1743048 - 1743135 | Not Available |
| dna-3-methyladenine glycosylase i | DWX04_07285 | Not Available | Negative | 1743382 - 1743960 | 22180.6 |
| tonb-dependent receptor | DWX04_07290 | Not Available | Positive | 1744271 - 1746571 | 86470.3 |
| duf4374 domain-containing protein | DWX04_07295 | Not Available | Positive | 1746629 - 1748029 | 51077.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

