Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX04_07100 | Not Available | Negative | 1704238 - 1704984 | 28692.4 |
| glycosyltransferase | DWX04_07105 | Not Available | Negative | 1704977 - 1706239 | 47725.5 |
| glycosyltransferase | DWX04_07110 | Not Available | Negative | 1706252 - 1707367 | 42910.4 |
| hemolysin activation protein | DWX04_07115 | Not Available | Negative | 1707340 - 1708356 | 40425.5 |
| licd family protein | DWX04_07120 | Not Available | Negative | 1708370 - 1709167 | 31729.4 |
| nad/nadp octopine/nopaline dehydrogenase | DWX04_07125 | Not Available | Negative | 1709171 - 1710271 | 41201.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWX04_07130 | Not Available | Negative | 1710268 - 1712073 | 70241.3 |
| glycosyl transferase | DWX04_07135 | Not Available | Positive | 1712164 - 1712994 | 31862.6 |
| acyltransferase | DWX04_07140 | Not Available | Negative | 1713017 - 1714042 | 39486.3 |
| lipopolysaccharide biosynthesis protein | DWX04_07145 | Not Available | Negative | 1714042 - 1715478 | 53569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

