Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DWX04_07050 | Not Available | Positive | 1692981 - 1693985 | 36538.8 |
| uracil phosphoribosyltransferase | DWX04_07055 | Not Available | Negative | 1694142 - 1694801 | 24410.4 |
| phosphoenolpyruvate carboxykinase (atp) | DWX04_07060 | Not Available | Positive | 1695062 - 1696669 | 59092.1 |
| proton-conducting membrane transporter | DWX04_07065 | Not Available | Positive | 1696775 - 1697425 | 23950.1 |
| translational gtpase typa | DWX04_07070 | Not Available | Negative | 1697486 - 1699288 | 67346.3 |
| hypothetical protein | DWX04_07075 | Not Available | Positive | 1699527 - 1699772 | 9701.57 |
| 30s ribosomal protein s15 | DWX04_07080 | Not Available | Positive | 1700071 - 1700340 | 10364.5 |
| s-ribosylhomocysteine lyase | DWX04_07085 | Not Available | Negative | 1700443 - 1700928 | 18473.2 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DWX04_07090 | Not Available | Negative | 1700940 - 1701635 | 25510.5 |
| hypothetical protein | DWX04_07095 | Not Available | Positive | 1701720 - 1704212 | 93020.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

