Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | DWX04_07000 | Not Available | Positive | 1678857 - 1679534 | 25332.5 |
| rhomboid family intramembrane serine protease | DWX04_07005 | Not Available | Positive | 1679515 - 1680408 | 33974.6 |
| endonuclease | DWX04_07010 | Not Available | Positive | 1680412 - 1681491 | 40377.0 |
| m3 family peptidase | DWX04_07015 | Not Available | Positive | 1681518 - 1683605 | 79002.5 |
| protein translocase subunit secdf | DWX04_07020 | Not Available | Positive | 1683784 - 1686771 | 109234.0 |
| sugar kinase | DWX04_07025 | Not Available | Negative | 1687036 - 1688100 | 38972.5 |
| nad-dependent epimerase/dehydratase family protein | DWX04_07030 | Not Available | Negative | 1688243 - 1689196 | 35269.3 |
| glycine c-acetyltransferase | DWX04_07035 | Not Available | Positive | 1689367 - 1690557 | 43568.4 |
| Trna-arg | Not Available | Not Available | Positive | 1690625 - 1690699 | Not Available |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DWX04_07045 | Not Available | Positive | 1691110 - 1692957 | 66247.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

