Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type atp synthase subunit b | DWX04_00345 | Not Available | Negative | 70449 - 71771 | 48182.8 |
| v-type atp synthase subunit a | DWX04_00350 | Not Available | Negative | 71807 - 73561 | 65817.4 |
| duf2764 domain-containing protein | DWX04_00355 | Not Available | Negative | 73580 - 74416 | 32620.1 |
| hypothetical protein | DWX04_00360 | Not Available | Negative | 74426 - 75016 | 21755.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 75272 - 75382 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 75461 - 78353 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 78478 - 78551 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 78566 - 78642 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 78775 - 80309 | Not Available |
| carboxypeptidase-like regulatory domain-containing protein | DWX04_00390 | Not Available | Negative | 81648 - 83204 | 60027.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

