Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_06710 | Not Available | Negative | 1598061 - 1598321 | 9944.3 |
| type iv secretory system conjugative dna transfer family protein | DWX04_06725 | Not Available | Negative | 1599350 - 1600978 | 61262.7 |
| mobilization protein | DWX04_06730 | Not Available | Negative | 1600987 - 1601922 | 36589.0 |
| mobilization protein | DWX04_06735 | Not Available | Negative | 1601934 - 1602617 | 26580.9 |
| hypothetical protein | DWX04_06740 | Not Available | Negative | 1602638 - 1603141 | 19154.3 |
| hypothetical protein | DWX04_06745 | Not Available | Negative | 1603445 - 1603885 | 17033.7 |
| hypothetical protein | DWX04_06750 | Not Available | Positive | 1604300 - 1604620 | 11751.3 |
| type iv secretory system conjugative dna transfer family protein | DWX04_06755 | Not Available | Positive | 1604688 - 1606292 | 61033.3 |
| xre family transcriptional regulator | DWX04_06760 | Not Available | Negative | 1606646 - 1606861 | 7991.84 |
| hypothetical protein | DWX04_06765 | Not Available | Negative | 1606842 - 1607138 | 11631.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

