Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DWX04_06660 | Not Available | Negative | 1589521 - 1591326 | 68067.5 |
| hypothetical protein | DWX04_06665 | Not Available | Negative | 1591338 - 1591571 | 8726.58 |
| para family protein | DWX04_06670 | Not Available | Negative | 1591587 - 1592366 | 28471.4 |
| hypothetical protein | DWX04_06675 | Not Available | Negative | 1592570 - 1592839 | 9733.04 |
| hypothetical protein | DWX04_06680 | Not Available | Positive | 1593265 - 1593462 | 7582.07 |
| duf1738 domain-containing protein | DWX04_06685 | Not Available | Positive | 1593459 - 1595078 | 61110.3 |
| hypothetical protein | DWX04_06690 | Not Available | Positive | 1595119 - 1596504 | 50504.0 |
| hypothetical protein | DWX04_06695 | Not Available | Positive | 1596535 - 1597311 | 29023.3 |
| hypothetical protein | DWX04_06700 | Not Available | Positive | 1597308 - 1597547 | 9626.33 |
| hypothetical protein | DWX04_06705 | Not Available | Negative | 1597711 - 1598034 | 12394.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

