Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_06560 | Not Available | Positive | 1570007 - 1573021 | 103980.0 |
| hypothetical protein | DWX04_06565 | Not Available | Positive | 1573033 - 1573836 | 28728.8 |
| hypothetical protein | DWX04_06570 | Not Available | Positive | 1573833 - 1574141 | 10903.7 |
| hypothetical protein | DWX04_06575 | Not Available | Positive | 1574042 - 1574479 | 16977.0 |
| hypothetical protein | DWX04_06580 | Not Available | Positive | 1574472 - 1574690 | 8477.16 |
| conjugal transfer protein | DWX04_06585 | Not Available | Positive | 1575247 - 1577691 | 94169.9 |
| hypothetical protein | DWX04_06590 | Not Available | Positive | 1577688 - 1578260 | 20870.7 |
| duf4141 domain-containing protein | DWX04_06595 | Not Available | Positive | 1578285 - 1578830 | 20091.2 |
| hypothetical protein | DWX04_06600 | Not Available | Positive | 1578835 - 1579632 | 29865.8 |
| hypothetical protein | DWX04_06605 | Not Available | Positive | 1579647 - 1580303 | 24723.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

