Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_06455 | Not Available | Positive | 1557718 - 1558098 | 13502.2 |
| dna-binding protein | DWX04_06460 | Not Available | Negative | 1558090 - 1558401 | 12063.6 |
| duf3408 domain-containing protein | DWX04_06465 | Not Available | Positive | 1558879 - 1559373 | 18456.6 |
| hypothetical protein | DWX04_06475 | Not Available | Positive | 1559765 - 1560139 | 14698.8 |
| duf4373 domain-containing protein | DWX04_06480 | Not Available | Positive | 1560224 - 1560595 | 14419.2 |
| hypothetical protein | DWX04_06485 | Not Available | Positive | 1560615 - 1560833 | 8234.98 |
| hypothetical protein | DWX04_06490 | Not Available | Positive | 1560836 - 1561057 | 8293.91 |
| hypothetical protein | DWX04_06495 | Not Available | Positive | 1561054 - 1561329 | 10750.8 |
| hypothetical protein | DWX04_06500 | Not Available | Positive | 1561322 - 1561543 | 8412.13 |
| hypothetical protein | DWX04_06505 | Not Available | Positive | 1561563 - 1561826 | 9725.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

