Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14
Accession NumberQRXI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | DWX04_00290 | Not Available | - | 56664 - 57998 | 51346.5 |
| abc transporter permease | DWX04_00295 | Not Available | - | 58002 - 58793 | 28734.3 |
| abc transporter permease | DWX04_00300 | Not Available | - | 58787 - 59560 | 28468.5 |
| polyamine abc transporter atp-binding protein | DWX04_00305 | Not Available | - | 59597 - 60991 | 52078.5 |
| ahpc/tsa family protein | DWX04_00315 | Not Available | + | 61514 - 62605 | 40190.0 |
| alpha-glucan family phosphorylase | DWX04_00320 | Not Available | - | 62832 - 65396 | 98180.8 |
| glycosyl transferase | DWX04_00325 | Not Available | - | 65425 - 67095 | 63540.8 |
| v-type atp synthase subunit k | DWX04_00330 | Not Available | - | 67349 - 67813 | 15421.2 |
| v-type atp synthase subunit i | DWX04_00335 | Not Available | - | 68027 - 69832 | 67299.5 |
| v-type atp synthase subunit d | DWX04_00340 | Not Available | - | 69829 - 70434 | 23447.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
