Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family peptidase | DWX04_06185 | Not Available | Negative | 1482629 - 1484515 | 70630.0 |
| blai/meci/copy family transcriptional regulator | DWX04_06190 | Not Available | Negative | 1484549 - 1484911 | 14040.8 |
| glucuronyl hydrolase | DWX04_06195 | Not Available | Negative | 1485122 - 1486345 | 46484.3 |
| glycoside hydrolase | DWX04_06200 | Not Available | Negative | 1486363 - 1488012 | 61638.1 |
| alpha-glucosidase | DWX04_06205 | Not Available | Negative | 1488166 - 1490103 | 73607.1 |
| hypothetical protein | DWX04_06210 | Not Available | Negative | 1490245 - 1492881 | 98652.5 |
| serine hydrolase | DWX04_06215 | Not Available | Negative | 1492888 - 1493973 | 39716.5 |
| glycoside hydrolase family 127 protein | DWX04_06220 | Not Available | Negative | 1494051 - 1495973 | 73158.0 |
| glycoside hydrolase | DWX04_06225 | Not Available | Negative | 1496100 - 1497485 | 52210.6 |
| hypothetical protein | DWX04_06230 | Not Available | Negative | 1497581 - 1499194 | 61005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

