Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_06135 | Not Available | Negative | 1465708 - 1466481 | 29910.6 |
| right-handed parallel beta-helix repeat-containing protein | DWX04_06140 | Not Available | Negative | 1466737 - 1468521 | 66746.6 |
| gfo/idh/moca family oxidoreductase | DWX04_06145 | Not Available | Negative | 1468875 - 1470425 | 57379.5 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_06150 | Not Available | Negative | 1470655 - 1472466 | 69404.4 |
| susc/raga family tonb-linked outer membrane protein | DWX04_06155 | Not Available | Negative | 1472484 - 1475885 | 126045.0 |
| duf4974 domain-containing protein | DWX04_06160 | Not Available | Negative | 1476014 - 1476988 | 37350.9 |
| rna polymerase sigma-70 factor | DWX04_06165 | Not Available | Negative | 1477117 - 1477662 | 21780.4 |
| tlpa family protein disulfide reductase | DWX04_06170 | Not Available | Negative | 1477925 - 1480033 | 80243.8 |
| thiol:disulfide interchange protein | DWX04_06175 | Not Available | Negative | 1480054 - 1481244 | 44917.8 |
| hypothetical protein | DWX04_06180 | Not Available | Negative | 1481275 - 1482618 | 51729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

