Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_06085 | Not Available | Positive | 1454998 - 1455276 | 10749.0 |
| peptide chain release factor 1 | DWX04_06090 | Not Available | Positive | 1455260 - 1456375 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | DWX04_06095 | Not Available | Positive | 1456412 - 1457230 | 30601.6 |
| hd domain-containing protein | DWX04_06100 | Not Available | Positive | 1457319 - 1458554 | 47185.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DWX04_06105 | Not Available | Positive | 1458687 - 1459727 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DWX04_06110 | Not Available | Positive | 1459733 - 1461118 | 51226.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWX04_06115 | Not Available | Positive | 1461135 - 1461902 | 27754.7 |
| hypothetical protein | DWX04_06120 | Not Available | Positive | 1461965 - 1462528 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWX04_06125 | Not Available | Positive | 1462580 - 1463482 | 35087.3 |
| alpha-l-fucosidase | DWX04_06130 | Not Available | Positive | 1463491 - 1465530 | 76826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

